Comparisons
Helix Studio vs CRISPResso2
Integrated Genome IDE versus standalone amplicon analysis.
Compare Helix Studio’s integrated design, evidence generation, and NGS interpretation with CRISPResso2 amplicon analysis in a single Genome IDE view.
System of Record →Section 1
What the tool is
CRISPResso2 is a great amplicon analysis package; Helix extends that idea into an IDE that also handles design, evidence generation, and visualization.
Section 2
Why scientists care
Switching between design tools and offline analysis scripts slows teams and invites version errors.
Section 3
How Helix solves it
NGS uploads attach to specific guides/pegRNAs for automatic pairing
Section 4
How the algorithm works
Analysis uses Helix’s alignment and outcome-calling stack with visualization optimized for interactive review.
Section 5
Try it in Helix Studio
Import your reads, map them to Helix designs, and review outcomes alongside evidence passes.
Section 6
FAQ
Can I still run CRISPResso2?
Yes—Helix can complement or replace it; data can be imported from CRISPResso2 outputs.
Do you support pooled screens?
Yes—associate guides with barcodes and review pooled outcomes in Helix.
What about Prime Editing reads?
Prime Editing outcomes are modeled and visualized alongside CRISPR reads.